Bullet Blender Publications by Sample Type
The Bullet Blender homogenizers have been used in a wide variety of applications to complete studies across the globe. Below are scholarly publications that have utilized this innovative technology. Browse by Sample Type.
Aorta - Mouse
Gao N, Huang J, He W, Zhu M, Kamm KE, Stull JT (2013) Signaling through Myosin Light Chain Kinase in Smooth Muscles. J Biol Chem 2013 Jan 28. [Epub ahead of print]
Hou CJ, Tsai CH, Su CH, Wu YJ, Chen SJ, Chiu JJ, Shiao MS, Yeh HI (2008) Diabetes reduces aortic endothelial gap junctions in ApoE-deficient mice: simvastatin exacerbates the reduction. J Histochem Cytochem 56(8):745-752
Kuang SQ, Kwartler CS, Byanova KL, Pham J, Gong L, Prakash SK, Huang J, Kamm KE, Stull JT, Sweeney HL, Milewicz DM (2012) Rare, Nonsynonymous Variant in the Smooth Muscle-Specific Isoform of Myosin Heavy Chain, MYH11, R247C, Alters Force Generation in the Aorta and Phenotype of Smooth Muscle Cells. Circ Res 110(11):1411-22
Lee YW, Lee WH, Kim PH (2010) Role of NADPH oxidase in interleukin-4-induced monocyte chemoattractant protein-1 expression in vascular endothelium. Inflamm Res 59(9):755-765
Lee YW, Lee WH, Kim PH (2010) Oxidative mechanisms of IL-4 induced IL-6 expression in vascular endothelium. Cytokine 49(1):73-79
Artery - Mouse
Kassan M, Galan M, Partyka M, Trebak M, Matrougui K (2011) Interleukin-10 released by CD4(+)CD25(+) natural regulatory T cells improves microvascular endothelial function through inhibition of NADPH oxidase activity in hypertensive mice. Arterioscler Thromb Vasc Biol 31(11):2532-42
Bladder - Rat
J Urol pii: S0022-5347(13)00012-8
Bone (femur) - Mouse
Carter LE, Kilroy G, Gimble JM, Floyd, ZE (2012) An improved method for isolation of RNA from bone. BMC Biotechnology 12:5
Brain - Hamster
Bessen RA, Shearin H, Martinka S, Boharski R, Lowe D, Wilham JM, Caughey B, Wiley JA (2010) Prion Shedding from Olfactory Neurons into Nasal Secretions. PLoS Pathog 6(4): e1000837
Brain - Mouse
Adeosun SO, Hou X, Jiao Y, Zheng B, Henry S, Hill R, He Z, Pani A, Kyle P, Ou X, Mosley T, Farley JM, Stockmeier C, Paul I, Bigler S, Brinton RD, Smeyne R, Wang JM (2012) Allopregnanolone Reinstates Tyrosine Hydroxylase Immunoreactive Neurons and Motor Performance in an MPTP-Lesioned Mouse Model of Parkinson's Disease. PLoS One 7(11):e50040
Ash ES, Alavijeh MS, Palmer AM, Mitchelmore C, Howlett DR, Francis PT, Broadstock M, Richardson JC (2011) Neurochemical changes in a double transgenic mouse model of Alzheimer's disease fed a pro-oxidant diet. Neurochem Int 57(5):504-11
Gooyit M, Suckow MA, Schroeder VA, Wolter WR, Mobashery S, Chang M (2012) Selective Gelatinase Inhibitor Neuroprotective Agents Cross the Blood-Brain Barrier. ACS Chem Neurosci 3(10):730-6
Henry S, Bigler S, Wang J (2009) High throughput analysis of neural progenitor cell proliferation in adult rodent hippocampus. Biosci Trends 3(6):233-238
Kwan KY, Lam MM, Johnson MB, Dube U, Shim S, Rašin MR, Sousa AM, Fertuzinhos S, Chen JG, Arellano JI, Chan DW, Pletikos M, Vasung L, Rowitch DH, Huang EJ, Schwartz ML, Willemsen R, Oostra BA, Rakic P, Heffer M, Kostovic I, Judaš M, Sestan N (2012) Species-Dependent Posttranscriptional Regulation of NOS1 by FMRP in the Developing Cerebral Cortex.Cell 11;149(4):899-911
Nerurkar PV, Johns LM, Buesa LM, Kipyakwai G, Volper E, Sato R, Shah P, Feher D, Williams PG, Nerurkar VR (2011) Momordica charantia (bitter melon) attenuates high-fat diet-associated oxidative stress and neuroinflammation.J Neuroinflammation 8: 64
Singh C, Liu L, Wang JM, Irwin RW, Yao J, Chen S, Henry S, Thompson RF, Brinton RD (2011) Allopregnanolone restores hippocampal-dependent learning and memory and neural progenitor survival in aging 3xTgAD and nonTg mice.Neurobiol Aging 33(8):1493-506
Brain - Rat
Park J, Zhang Y, Vykhodtseva N, Jolesz FA, McDannold NJ (2012) The kinetics of blood brain barrier permeability and targeted doxorubicin delivery into brain induced by focused ultrasound.J Control Release 162(1):134-42
Timmermann DB, Sandager-Nielsen K, Dyhring T, Smith M, Jacobsen AM, Nielsen EO, Grunnet M, Christensen JK, Peters D, Kohlhaas K, Olsen GM, Ahring PK (2012) Augmentation of cognitive function by NS9283, a stiochiometry-dependent positive allosteric modulator of alpha2- and alpha4-containing nicotinic acetylcholine receptors.Br J Pharmacol 167(1):164-82
Chorioallantoic Membrane - Chicken Embryo
Schewe DM, Aguirre-Ghiso JA (2008) ATF6alpha-Rheb-mTOR signaling promotes survival of dormant tumor cells in vivo. Proc Natl Acad Sci 105:10519-10524
Colon - Mouse
Alt C, Lam JS, Harrison MT, Kershaw KM, Samuelsson S, Toll L, D'Andrea A (2012) Nociceptin/orphanin FQ inhibition with SB612111 ameliorates dextran sodium sulfate-induced colitis. Eur J Pharmacol 683(1-3):285-93
Lowe EL, Crother TR, Rabizadeh S, Hu B, Wang H, Chen S, Shimada K, Wong MH, Michelsen KS, Arditi M (2010) Toll-Like Receptor 2 Signaling Protects Mice from Tumor Development in a Mouse Model of Colitis-Induced Cancer. PLoS One 5(9): e13027
McConnell BB, Kim SS, Yu K, Ghaleb AM, Takeda N, Manabe I, Nusrat A, Nagai R, Yang VW (2011) Krüppel-like factor 5 is important for maintenance of crypt architecture and barrier function in mouse intestine. Gastroenterology 141(4):1302-13, 1313.e1-6
McConnell BB, Kim SS, Bialkowska AB, Yu K, Sitaraman SV, Yang VW (2011) Kruppel-like factor 5 protects against dextran sulfate sodium-induced colonic injury in mice by promoting epithelial repair. Gastroenterology 140(2):540-549
Saleiro D, Murillo G, Benya RV, Bissonnette M, Hart J, Mehta RG (2012) Estrogen receptor-beta protects against colitis-associated neoplasia in mice. Int J Cancer 131(11):2553-61
Colon, Cecum - Rat
Goodrich KM, Fundaro G, Griffin LE, Grant A, Hulver MW, Ponder MA, Neilson AP (2012) Chronic administration of dietary grape seed extract increases colonic expression of gut tight junction protein occludin and reduces fecal calprotectinin: a secondary analysis of healthy Wistar Furth rats. Nutrition Res 32(10):787-94
Cranial Base - Mouse Embryo
Kwon HJ, Shin JO, Lee JM, Cho KW, Lee MJ, Cho SW, Jung HS (2011) Retinoic acid modulates chondrogenesis in the developing mouse cranial base. J Exp Zool B Mol Dev Evol 316(8):574-83
Ear - Mouse
Dong C, Sexton H, Gertrudes A, Akama T, Martin S, Virtucio C, Chen CW, Fan X, Wu A, Bu W, Liu L, Feng L, Jarnagin K, Freund YR (2013) Inhibition of Toll-Like Receptor-Mediated Inflammation In Vitro and In Vivo by a Novel Benzoxaborole. J Pharmacol Exp Ther 344(2):436-446
Kim H, Lee MR, Lee GS, An WG, Cho SI (2012) Effect of Sophora flavescens Aiton extract on degranulation of mast cells and contact dermatitis induced by dinitrofluorobenzene in mice. J Ethnopharmacol 142(1):253-8
Heart - Mouse
Cavasin MA, Demos-Davies K, Horn TR, Walker LA, Lemon DD, Birdsey N, Weiser-Evans MC, Harral J, Irwin DC, Anwar A, Yeager ME, Li M, Watson PA, Nemenoff RA, Buttrick PM, Stenmark KR, McKinsey TA (2012) Selective class I histone deacetylase inhibition suppresses hypoxia-induced cardiopulmonary remodeling through an antiproliferative mechanism. Circ Res 2;110(5):739-48
O'Shea KM, Chess DJ, Khairallah RJ, Rastogi S, Hecker PA, Sabbah HN, Walsh K, WC Stanley (2010) Effects of adiponectin deficiency on structural and metabolic remodeling in mice subjected to pressure overload. Am J Physiol Heart Circ Physiol 298(6): H1639-H1645
O'Shea KM, Chess DJ, Khairallah RJ, Hecker PA, Lei B, Walsh K, Des Rosiers C, Stanley WC (2010) omega-3 Polyunsaturated fatty acids prevent pressure overload-induced ventricular dilation and decrease in mitochondrial enzymes despite no change in adiponectin. Lipids Health Dis 9:95
Pavlov VI, La Bonte LR, Baldwin WM, Markiewski MM, Lambris JD, Stahl GL (2012) Absence of mannose-binding lectin prevents hyperglycemic cardiovascular complications. Am J Pathol 180(1):104-12
Vedantham V, Evangelista M, Huang Y, Srivastava D (2012) Spatiotemporal regulation of an Hcn4 enhancer defines a role for Mef2c and HDACs in cardiac electrical patterning. Dev Biol 2012 Oct 23. pii: S0012-1606(12)00574-X.
Wang H, Sreenivasan U, Gong DW, O'Connell KA, Dabkowski ER, Hecker PA, Ionica N, Konig M, Mahurkar A, Sun Y, Stanley WC, Sztalryd C (2013) Cardiomyocyte specific perilipin 5 over expression leads to myocardial steatosis, and modest cardiac dysfunction. J Lipid Res 2013 Jan 23. [Epub ahead of print]
Heart - Rat
El-Bakly WM, Louka ML, El-Halawany AM, Schaalan MF (2012) 6-gingerol ameliorated doxorubicin-induced cardiotoxicity: role of nuclear factor kappa B and protein glycation. Cancer Chemother Pharmacol 70(6):833-41
Genead R, Fischer H, Hussain A, Jaksch M, Andersson AB, Ljung K, Bulatovic I, Franco-Cereceda A, Elsheikh E, Corbascio M, Smith CI, Sylvén C, Grinnemo KH (2012) Ischemia-reperfusion injury and pregnancy initiate time-dependent and robust signs of up-regulation of cardiac progenitor cells. PLoS One 7(5):e36804
Lemon DD, Horn TR, Cavasin MA, Jeong MY, Haubold KW, Long CS, Irwin DC, McCune SA, Chung E, Leinwand LA, McKinsey TA (2011) Cardiac HDAC6 catalytic activity is induced in response to chronic hypertension. J Mol Cell Cardiol 51(1):41-50
Heart - Zebrafish
Yang J, Xu X (2012) Alpha-Actinin2 is required for the lateral alignment of Z discs and ventricular chamber enlargement during zebrafish cardiogenesis. FASEB J 26(10):4230-42
Intestinal Muscosa - Mouse
Kovalenko PL, Kunovska L, Jian CC, Gallo KA, Basson MD (2012) Loss of MLK3 signaling impedes ulcer healing by modulating MAPK signaling in mouse intestinal mucosa. Am J Physiol Gastrointest Liver Physiol 303(8):G951-60
Kovalenko PL, Basson MD (2012) Changes in morphology and function in small intestinal mucosa after Roux-en-Y surgery in a rat model. J Surg Res 177(1):63-9
Intestine - Broiler Chick
Shaw AL, van Ginkel FW, Macklin KS, Blake JP (2011) Effects of phytase supplementation in broiler diets on a natural Eimeria challenge in naive and vaccinated birds. Poult Sci 90(4):781-790
Intestine - Mouse
Forester SC, Gu Y, Lambert JD (2012) Inhibition of starch digestion by the green tea polyphenol, (-)-epigallocatechin-3-gallate. Mol Nutr Food Res 56(11):1647-54
Kidney - Mouse
Carls tröm M, Brown RD, Yang T, Hezel M, Larsson E, Scheffer PG, Teerlink T, Lundberg JO, Persson AE (2013) L-arginine or tempol supplementation improve renal and cardiovascular function in rats with reduced renal mass and chronic high salt intake. Acta Physiol (Oxf) doi: 10.1111/apha.12079. [Epub ahead of print]
Liver - Fish
Roberts SC, Noyes PD, Gallagher EP, Stapleton HM (2011) Species-Specific Differences and Structure-Activity Relationships in the Debromination of PBDE Congeners in Three Fish Species.Environ Sci Technol 45(5):1999-2005
Van Wettere AJ, Law JM, Hinton DE, Kullman SW (2012) Anchoring Hepatic Gene Expression with Development of Fibrosis and Neoplasia in a Toxicant-induced Fish Model of Liver Injury.Toxicol Pathol 2012 Nov 28. [Epub ahead of print]
Liver - Mouse
Chuang HL, Huang YT, Chiu CC, Liao CD, Hsu FL, Huang CC, Hou CC (2011) Metabolomics characterization of energy metabolism reveals glycogen accumulation in gut-microbiota-lacking mice. J Nutr Biochem 23(7):752-8
Gornicka A, Morris-Stiff G, Thapaliya S, Papouchado BG, Berk M, Feldstein AE (2011) Transcriptional profile of genes involved in oxidative stress and antioxidant defense in a dietary murine model of steatohepatitis. Antioxid Redox Signal 15(2): 437-45
Harcourt BE, Forbes JM, Matthews VB (2012) Obesity Induced Renal Impairment is Exacerbated in Interleukin-6 knockout (IL-6-/-) Mice. Nephrology 17(3):257-62
Hwang JT, Kim SH, Hur HJ, Kim HJ, Park JH, Sung MJ, Yang HJ, Ryu SY, Kim YS, Cha MR, Kim MS, Kwon DY (2011) Decursin, an Active Compound Isolated from Angelica gigas, Inhibits Fat Accumulation, Reduces Adipocytokine Secretion and Improves Glucose Tolerance in Mice Fed a High-Fat Diet. Phytother Res 25(5):633-8
Kozul-Horvath CD, Zandbergen F, Jackson BP, Enelow RI, Hamilton JW (2012) Effects of Low-Dose Drinking Water Arsenic on Mouse Fetal and Postnatal Growth and Development. PLoS ONE 7(5): e38249
Jones MR, Blahna MT, Kozlowski E, Matsuura KY, Ferrari JD, Morris SA, Powers JT, Daley GQ, Quinton LJ, Mizgerd JP (2012) Zcchc11 Uridylates Mature miRNAs to Enhance Neonatal IGF-1 Expression, Growth, and Survival. PLoS Genet 8(11):e1003105
Olsen AL, Sackey BK, Marcinkiewicz C, Boettiger D, Wells RG (2012) Fibronectin extra domain-A promotes hepatic stellate cell motility but not differentiation into myofibroblasts. Gastroenterology142(4):928-937
Rayner KJ, Sheedy FJ, Esau CC, Hussain FN, Temel RE, Parathath S, van Gils JM, Rayner AJ, Chang AN, Suarez Y, Fernandez-Herando C, Fisher EA, Moore KJ (2011) Antagonism of miR-33 in mice promotes reverse cholesterol transport and regression of atherosclerosis. J Clin Invest 121(7):2921-2931
Sun X, Tang Y, Tan X, Li Q, Zhong W, Sun X, Jia W, McClain CJ, Zhou Z (2012) Activation of peroxisome proliferator-activated receptor-γ by rosiglitazone improves lipid homeostasis at the adipose tissue-liver axis in ethanol-fed mice. Am J Physiol Gastrointest Liver Physiol Mar;302(5):G548-57
Wang Q, Na B, Ou JH, Pulliam L, Yen TS (2012) Hepatitis B Virus Alters the Antioxidant System in Transgenic Mice and Sensitizes Hepatocytes to Fas Signaling. PLoS One 7(5):e36818
Liver - Laughing Gull
Jenko K, Karouna-Renier NK, Hoffman DJ (2012) Gene expression, glutathione status, and indicators of hepatic oxidative stress in laughing gull (Larus atricilla) hatchlings exposed to methylmercury. Environ Toxicol Chem 31(11):2588-96
Lung - Mouse
Alder JK, Guo N, Kembou F, Parry EM, Anderson CJ, Gorgy AI, Walsh MF, Sussan T, Biswal S, Mitzner W, Tuder RM, Armanios M (2011) Telomere Length is a Determinant of Emphysema Susceptibility. Am J Respir Crit Care Med 184(8): 904-912
El Agha E, Al Alam D, Carraro G, Mackenzie B, Goth K, De Langhe SP, Voswinckel R, Hajihosseini MK, Rehan VK, Bellusci S (2012) Characterization of a Novel Fibroblast Growth Factor 10 (Fgf10) Knock-In Mouse Line to Target Mesenchymal Progenitors during Embryonic Development. PLoS One 2012;7(6):e38452
Ma W, Han W, Greer PA, Tuder RM, Toque HA, Wang KKW, Caldwell RW, Su Y (2011) Calpain mediates pulmonary vascular remodeling in rodent models of pulmonary hypertension, and its inhibition attenuates pathologic features of disease. J Clin Invest 121(11):4548-4566
Quinton LJ, Mizgerd JP, Hilliard KL, Jones MR, Kwon CY, Allen E (2012) Leukemia Inhibitory Factor Signaling Is Required for Lung Protection during Pneumonia. J Immunol 188(12):6300-8
Sanderson SD, Thomas ML, Kis K, Virts EL, Herrera EB, Widmann S, Sepulveda H, Phillips J (2012) Innate Immune Induction and Influenza Protection Elicited by a Response-Selective Agonist of Human C5a. PLoS ONE 7(7): e40303
Lung - Rat
Konsavage WM, Zhang L, Wu Y, Shenberger JS (2011) Hyperoxia-induced Activation of the Integrated Stress Response in the Newborn Rat Lung. Am J Physiol Lung Cell Mol Physiol 302(1):L27-35
Lymph Node - Mouse
Sahu RP, Petrache I, Van Demark MJ, Rashid BM, Ocana JA, Tang Y, Yi Q, Turner MJ, Konger RL, Travers JB (2013) Cigarette Smoke Exposure Inhibits Contact Hypersensitivity via the Generation of Platelet-Activating Factor Agonists. J Immunol 2013 Jan 25. [Epub ahead of print]
Muscle - Fish
Foott JS, Fogerty R (2011) Juvenile Stanislaus River Chinook salmon pathogen and physiology assessment: January – May 2011. U.S. Fish and Wildlife Service FY2011 Technical Report.
Tuckey NPL, Forgan LG, Jerrett AR (2012) Fillet colour correlates with biochemical status in Australasian snapper (Pagrus auratus) during storage in refrigerated seawater. Aquaculture356-357:256-63
Muscle - Mouse
Battaglia GM, Zheng D, Hickner RC, Houmard JA (2012) Effect of exercise training on metabolic flexibility in response to a high fat diet in obese individuals. Am J Physiol Endocrinol Metab 303(12):E1440-5
Brault JJ, Pizzimenti NM, Dentel JN, Wiseman RW (2013) Selective inhibition of ATPase activity during contraction alters the activation of p38 MAP kinase isoforms in skeletal muscle. J Cell Biochem 2013 Jan 7. doi: 10.1002/jcb.24486. [Epub ahead of print]
Carreras A, Kayali F, Zhang J, Hirotsu C, Wang Y, Gozal D (2012) Metabolic Effects Of Intermittent Hypoxia In Mice: Steady Versus High Frequency Applied Hypoxia Daily During The Rest Period. Am J Physiol Regul Integr Comp Physiol 303(7):R700-9
Files DC, D'Alessio FR, Johnston LF, Kesari P, Aggarwal NR, Garibaldi BT, Mock JR, Simmers JL, Degorordo A, Murdoch J, Willis MS, Patterson C, Tanskersley CG, Messi ML, Liu C, Delbono O, Furlow JD, Bodine SC, Cohn RD, King LS, Crow MT (2011) A Critical Role for Muscle Ring Finger-1 in Acute Lung Injury-Associated Skeletal Muscle Wasting. Am J Respir Crit Care Med 185(8):825-34
Hanke ML, Heim CE, Angle A, Sanderson SD, Kielian T (2013) Targeting Macrophage Activation for the Prevention and Treatment of Staphylococcus aureus Biofilm Infections. J Immunol 2013 Jan 30. [Epub ahead of print]
Percival JM, Siegel MP, Knowels G, Marcinek DJ (2012) Defects in mitochondrial localization and ATP synthesis in the mdx mouse model of Duchenne muscular dystrophy are not alleviated by PDE5 inhibition. Hum Mol Genet 22(1):153-67
Siegel MP, Wilbur T, Mathis M, Shankland EG, Trieu A, Harper ME, Marcinek DJ (2012) Impaired adaptability of in vivo mitochondrial energetics to acute oxidative insult in aged skeletal muscle. Mech Ageing Dev 133(9-10):620-8
Welle S, Mehta S, Burgess K (2012) Effect of postdevelopmental myostatin depletion on myofibrillar protein metabolism. Am J Physiol Endocrinol Metab 300:E993-E1001
Yamada E, Pessin JE, Kurland IJ, Schwartz GJ, Bastie CC (2010) Fyn-dependent regulation of energy expenditure and body weight is mediated by tyrosine phosphorylation of LKB1. Cell Metab 11:113-124
Yamada E, Bastie CC, Koga H, Wang Y, Cuervo AM Pessin JE (2012) Mouse Skeletal Muscle Fiber-Type-Specific Macroautophagy and Muscle Wasting Are Regulated by a Fyn/STAT3/Vps34 Signaling Pathway. Cell Reports 1(5):557-69
Muscle - Rat
Chiang J, Shen YC, Wang YH, Hou YC, Chen CC, Liao JF, Yu MC, Juan CW, Liou KT (2009) Honokiol protects rats against eccentric exercise-induced skeletal muscle damage by inhibiting NF-kappaB induced oxidative stress and inflammation. Eur J Pharmacol 610:119-127
Nasal mucosa - Mouse
Xie F, D'Agostino J, Zhou X, Ding X (2013) Bioactivation of the Nasal Toxicant 2,6-Dichlorobenzonitrile: An Assessment of Metabolic Activity in Human Nasal Mucosa and Identification of Indicators of Exposure and Potential Toxicity. Chem Res Toxicol 2013 Jan 29. [Epub ahead of print]
Olfactory mucosa - Mouse
Xie F, Zhou X, Behr M, Fang C, Horii Y, Gu J, Kannan K and Ding X (2010) Mechanisms of olfactory toxicity of the herbicide 2,6-dichlorobenzonitrile: Essential roles of CYP2A5 and target-tissue metabolic activation. Toxicol Appl Pharmacol 249:101-6
Xie F, Zhou X, Genter MB, Behr M, Gu J, Ding X (2011) The Tissue-Specific Toxicity of Methimazole in the Mouse Olfactory Mucosa Is Partly Mediated through Target-Tissue Metabolic Activation by CYP2A5. Drug Metab Dispos. 39(6):947-51
Small Intestine and Ileum - Guinea Pig
Kang M, Maguma HT, Smith TH, Ross GR, Dewey WL, Akbarali HI (2011) The role of Beta-arrestin2 in the mechanism of morphine tolerance in the mouse and guinea pig gastrointestinal tract. J Pharmacol Exp Ther 340(3):5
Skin - Mouse
Kim CH, Choi YS, Cheong KA, Lee AY (2013) Mechanism underlying the effect of combined therapy using glucosamine and low-dose cyclosporine A on the development of atopic dermatitis-like skin lesions in NC/Nga mice. Int Immunopharmacol pii: S1567-5769(13) 00019-2
Skin - Rat
von Grote EC, Venkatakrishnan V, Duo J, Stenken JA (2011) Long-term subcutaneous microdialysis sampling and qRT-PCR of MCP-1, IL-6 and IL-10 in freely-moving rats. Mol Biosyst. 7(1):150-61
Stomach - Mouse
Rolig AS, Cech C, Ahler E, Carter JE, Ottemann KM (2013) The degree of Helicobacter pylori inflammation is manipulated by the pre-infection host microbiota. Infect Immun [Epub ahead of print]
Rolig AS, Shanks J, Carter JE, Ottemann KM (2012) Helicobacter pylori requires TlpD-driven chemotaxis to proliferate in the antrum. Infect Immun 80(10):3713-20
Rolig AS, Carter JE, Ottemann KM (2011) Bacterial chemotaxis modulates host cell apoptosis to establish a T-helper cell, type 17 (Th17)-dominant immune response in Helicobacter pylori infection. PNAS 108; 19749-19754
Sause WE, Castillo AR, Ottemann KM (2012) The Helicobacter pylori autotransporter ImaA (HP0289) modulates the immune response and contributes to host colonization . Infect Immun 80(7):2286-96
Stomach - Rat
Rocha BS, Gago B, Barbosa RM, Lundberg JO, Mann GE, Radi R, Laranjinha J (2012) Pepsin is nitrated in the rat stomach acquiring antiulcerogenic activity: a novel interaction between dietary nitrate and gut proteins. Free Radic Biol Med Free Radic Biol Med. pii: S0891-5849(12)01867-9
Tumor Melanoma - Mouse
Sahu RP, Turner MJ, Dasilva SC, Rashid BM, Ocana JA, Perkins SM, Konger RL, Touloukian CE, Kaplan MH, Travers JB (2012) The environmental stressor ultraviolet B radiation inhibits murine antitumor immunity through its ability to generate platelet-activating factor agonists. Carcinogenesis 33(7):1360-7
Wound Tissue - Mouse
Petreaca ML, Do D, Dhall S, McLelland D, Serafino A, Lyubovitsky J, Schiller N, Martins-Green MM (2012) Deletion of a tumor necrosis superfamily gene in mice leads to impaired healing that mimics chronic wounds in humans. Wound Repair Regen 20(3): 353-366
Various Tissues (skin, lung, spleen) - Mouse
Nichols DP, Caceres S, Caverly L, Fratelli C, Kim SH, Malcolm K, Poch KR, Saavedra M, Solomon G, Taylor-Cousar J, Moskowitz S, Nick JA (2013) Effects of azithromycin in Pseudomonas aeruginosa burn wound infection. J Surg Res pii: S0022-4804(13)00088-7
Various Tissues (kidney, liver, heart) - Mouse
Leontieva OV, Paszkiewicz GM, Blagosklonny MV (2012) Mechanistic or mammalian target of rapamycin (mTOR) may determine robustness in young male mice at the cost of accelerated aging. Aging 4(12): 899-916
Various Tissues (artery, liver, spleen, lung) - Rat
Chorny M, Fishbein I, Tengood JE, Adamo RF, Alferiev IS, Levy RJ (2013) Site-specific gene delivery to stented arteries using magnetically guided zinc oleate-based nanoparticles loaded with adenoviral vectors. FASEB J 2013 Feb 13. [Epub ahead of print]
Various Tissues (liver, muscle) - Hamster
Dekker MJ, Baker C, Naples M, Samsoondar J, Zhang R, Qiu W, Sacco J, Adeli K (2013) Inhibition of sphingolipid synthesis improves dyslipidemia in the diet-induced hamster model of insulin resistance: Evidence for the role of sphingosine and sphinganine in hepatic VLDL-apoB100 overproduction. Atherosclerosis [Epub ahead of print]
Various Tissues (kidney, heart) - Mouse
Hanke ML, Angle A, Kielian T (2012) MyD88-Dependent Signaling Influences Fibrosis and Alternative Macrophage Activation during Staphylococcus aureus Biofilm Infection. PLoS One 7(8):e42476
Various Tissues (lung, diaphragm, heart, muscle) - Mouse
Moghadaszadeh B, Rider BE, Lawlor MW, Childers MK, Grange RW, Gupta K, Boukedes SS, Owen CA, Beggs AH (2013) Selenoprotein N deficiency in mice is associated with abnormal lung development. FASEB J 2013 Jan 16. [Epub ahead of print]
Various Tissues (brain, liver, pancreas) - Mouse
Ward MS, Lamb J, May JM, Harrison FE (2012) Behavioral and Monoamine changes following severe vitamin C deficiency. J Neurochem 124(3)363-75
Various Tissues (bladder and kidney) - Mouse
Thai KH, Thathireddy A, Hsieh MH (2010) Transurethral Induction of Mouse Urinary Tract Infection. J Vis Exp (42). pii:2070
Various Tissues (aorta and liver) - Mouse
Shai SY, Sukhanov S, Higashi Y, Vaughn C, Rosen C, Delafontaine, P (2011) Low circulating insulin-like growth factor I increases atherosclerosis in ApoE-deficient mice.Am J Physiol Heart Circ Physiol 300(5):H1898-906
Various Tissues (liver, spleen, brain) - Mouse
Gogal RM Jr, Kerr R, Kingsley DH, Granata LA, LeRoith T, Holliman SD, Dancho BA, Flick GJ Jr (2011) High hydrostatic pressure processing of murine norovirus 1-contaminated oysters inhibits oral infection in STAT-1(-/-)-deficient female mice. J Food Prot 74(2):209-14
Various Tissues (spleen, kidney, liver, lungs, adipose, brain) - Mouse
Kumar M, Roe K, Nerurkar PV, Namekar M, Orillo B, Verma S, Nerurkar VR (2012) Impaired Virus Clearance, Compromised Immune Response and Increased Mortality in Type 2 Diabetic Mice Infected with West Nile Virus. PLoS ONE 7(8): e44682
Various Tissues (aorta, kidney) - Mouse
Fox KA, Longo M, Tamayo E, Gamble P, Makhlouf M, Mateus JF, Saade GR (2012) Sex-specific effects of nicotine exposure on developmental programming of blood pressure and vascular reactivity in the C57Bl/6J mouse. Am J Obstet Gynecol 207(3):208.e1-9
Various Tissues (liver, heart, lung) - Fetal Guinea Pig
Al-Hasan YM, Evans LC, Pinkas GA, Dabkowski ER, Stanley WC, Thompson LP (2012) Chronic Hypoxia Impairs Cytochrome Oxidase Activity Via Oxidative Stress in Selected Fetal Guinea Pig Organs. Reproductive Sciences 2012 Aug 24 [Epub ahead of print]
Various Tissues (kidney, liver, lung, spleen) - Mouse
Adhikari RP, Karauzum H, Sarwar J, Abaandou L, Mahmoudieh M, Boroun AR, Hong V, Nguyen t, Devi VS, Shulenin S, Warfield KL, Aman MJ (2012) Novel Structurally Designed Vaccine for S. aureus alpha-Hemolysin: Protection against Bacteremia and Pneumonia. PLoS ONE 7(6): e38567
Various Tissues (liver and brain) - Rats
Zahr NM, Luong R, Sullivan EV, Pfefferbaum A (2010) Measurement of Serum, Liver, and Brain Cytokine Induction, Thiamine Levels, and Hepatopathology in Rats Exposed to a 4-Day Alcohol Binge Protocol. Alcohol Clin Exp Res 34(11):1858-70
Various Tissues (kidney, liver, heart) - Rat
Carlström M, Persson AEG, Larsson E, Hezel M, Scheffer PG, Teerlink T, Weitzberg E, Lundberg JO (2012) Dietary nitrate attenuates oxidative stress, prevents cardiac and renal injuries and reduces blood pressure in salt-induced hypertension. Cardiovasc Res 89(3):574-85
Various Tissues (brain, olfactory bulb, adrenal gland, spleen, lymph node, heart, tongue, nasal turbinate) - Hamster
Bessen RA, Robinson CJ, Seelig DM, Watschke CP, Lowe D, Shearin H, Martinka S, Babcock AM (2011) Transmission of chronic wasting disease identifies a prion strain causing cachexia and heart infection in hamsters. PLoS One 6(12):e28026
Various Tissues (olfactory bulb, nasal turbinate) - Hamster
Bessen RA, Wilham JM, Lowe D, Watschke CP, Shearin H, Martinka S, Caughey B, Wiley JA (2012) Accelerated Shedding of Prions following Damage to the Olfactory Epithelium. J Virol 86(3):1777-88
Various Tissues (liver, heart, muscle) - Mouse
Hecker PA, Mapanga RF, Kimar CP, Ribeiro RF, Brown BH, O’Connell KA, Cox JW, Shekar KC, Asemu G, Essop MF, Stanley WC (2012) Effects of Glucose 6-Phosphate Dehydrogenase Deficiency on the Metabolic and Cardiac Responses to Obesogenic or High Fructose Diets. Am J Physiol Endocrinol Metab 303(8):E959-72
Miller BF, Robinson MM, Bruss MD, Hellerstein M, Hamilton KL (2011) A comprehensive assessment of mitochondrial protein synthesis and cellular proliferation with age and caloric restriction. Aging Cell 11(1):150-61
Miller BF, Robinson MM, Reuland DJ, Drake JC, Peelor III FF, Bruss MD, Hellerstein MK, Hamilton KL (2012) Calorie Restriction Does Not Increase Short-term or Long-term Protein Synthesis. J Gerontol A Biol Sci Med Sci doi: 10.1093/gerona/gls219
Various Tissues (spine, brain, stomach, small intestine, colon) - Mouse
Lancaster KZ, Pfeiffer JK (2010) Limited trafficking of a neurotropic virus through inefficient retrograde axonal transport and the type I interferon response. PLoS Pathog 6(3):e10000791
Various Tissues (liver, muscle, fat, aorta) - Mouse
Carlstrom M, Larsen FJ, Nystrom T, Hezel M, Borniquel S, Weitzberg E, Lundberg JO (2010) Dietary inorganic nitrate reverses features of metabolic syndrome in endothelial nitric oxide synthase-deficient mice. Proc Natl Acad Sci U S A 107(41):17716-20
Various Tissues (liver, spleen, lung, kidney, brain, heart, aorta, peritoneal macrophages) - Mouse
Rayner KJ, Suarez Y, Davalos A, Parathath S, Fitzgerald ML, Tamehiro N, Fisher EA, Moore KJ, Fernandez-Hernandomi C (2010) MiR-33 Contributes to the Regulation of Cholesterol Ho. Science 328(5985):1570-1573
Various Tissues (aorta, liver, kidney) - Mouse
Fox KA, Longo M, Tamayo E, Kechichian T, Bytautiene E, Hankins GDV, Saade GR, Costantine MM (2011) Effects Of Pravastatin On Mediators Of Vascular Function In A Mouse Model Of Soluble Fms-Like Tyrosine Kinase-1Induced Preeclampsia. Am J Obstet Gynecol 205(4):366.e1-5
Various Tissues (bladder, liver, kidney, heart, intestine, lung, muscle, rectum, skin, spleen) - Mouse
Choi HS, Nasr K, Alyabyev S, Feith D, Lee JH, Kim SH, Ashitate Y, Hyun H, Patonay G, Strekowski L, Henary M, Frangioni JV (2011) Synthesis and in vivo fate of zwitterionic near-infrared fluorophores. Angew Chem Int Engl 50(28):6258-63
Various Tissues (ear, tail, brain) - Mouse
Choi KY, Chang K, Pickel JM, Badger JD 2nd, Roche KW (2011) Expression of the metabotropic glutamate receptor 5 (mGluR5) induces melanoma in transgenic mice. Proc Natl Acad Sci U S A 108(37): 15219-24
Various (liver, spleen) - Mouse
Smith JS, Xu Z, Tian J, Palmer D, Ng P, Byrnes AP (2011) The Role of Endosomal Escape and Mitogen-Activated Protein Kinases in Adenoviral Activation of the Innate Immune Response. PLoS one 6(10): e26755
Various (liver, pituitary, heart, muscle) - Rat
Giera S, Bansal R, Ortiz-Toro TM, Taub DG, Zoeller RT (2011) Individual polychlorinated biphenyl (PCB) congeners produce tissue- and gene-specific effects on thyroid hormone signaling during development. Endocrinology 152(7):2909-19
Various Tissues (muscle, brain) - Mouse
Lancaster KZ, Pfeiffer JK (2011) Mechanisms Controlling Virulence Thresholds of Mixed Viral Populations. J Virol 85(19):9778-88
Various Tissues (brain, liver, placenta) - Mouse
Drever N, Yin H, Kechichian T, Costantine M, Longo M, Saade GR, Bytautiene E (2012) The expression of antioxidant enzymes in a mouse model of fetal alcohol syndrome. Am J Obstet Gynecol 206(4):358.e19-22
Various Tissues (spleen, liver, fetus, placenta, amniotic fluid) - Mouse
Poulsen KP, Faith NG, Steinberg H, Czuprynski CJ (2012) Bacterial load and inflammation in fetal tissues is not dependent on IL-17a or IL-22 in 10-14 day pregnant mice infected with Listeria monocytogenes. Microb Pathog pii: S0882-4010(12)00195-7
Austin WR, Armijo AL, Campbell DO, Singh AS, Hsieh T, Nathanson D, Herschman HR, Phelps ME, Witte ON, Czernin J, Radu CG (2012) Nucleoside salvage pathway kinases regulate hematopoiesis by linking nucleotide metabolism with replication stress. J Exp Med 209(12):2215-28
Brain - Human
Kang HJ, Kawasawa YI, Cheng F, Zhu Y, Xu X, Li M, Sousa AM, Pletikos M, Meyer KA, Sedmak G, Guennel T, Shin Y, Johnson MB, Krsnik Z, Mayer S, Fertuzinhos S, Umlauf S, Lisgo SN, Vortmeyer A, Weinberger DR, Mane S, Hyde TM, Huttner A, Reimers M, Kleinman JE, Sestan N. (2011) Spatio-temporal transcriptome of the human brain. Nature 478(7370):483-9
Colon - Human
Repnik K, Potocnik U (2010) CTLA4 CT60 Single-Nucleotide Polymorphism Is Associated with Slovenian Inflammatory Bowel Disease Patients and Regulates Expression of CTLA4 Isoforms. DNA Cell Biol 29(10):603-10
Repnik K, Potocnik U (2011) Haplotype in the IBD5 region is associated with refractory Crohn’s disease in Slovenian patients and modulates expression of the SLC22A5 gene. J Gastroenterology 46:1081-1091
Genital Warts - Human
Ball SLR, Winder DM Vaughan K, Hanna N , Levy J , Sterling JC, Stanley MA, Goon PKC (2011) Analyses of human papillomavirus genotypes and viral loads in anogenital warts. J Med Viorl 83(8):1345-50
Heart - Pig
Lassaletta AD, Chu LM, Elmadhun NY, Burgess TA, Feng J, Robich MP, Sellke FW (2012) Cardioprotective effects of red wine and vodka in a model of endothelial dysfunction. J Surg Res 178(2):586-92
Lassaletta AD, Chu LM, Elmadhun NY, Robich MP, Hoffman ZG, Kim DJ, Sellke FW (2012) Mechanism for reduced pericardial adhesion formation in hypercholesterolemic swine supplemented with alcohol. Eur J Cardiothorac Surg 2012 Sep 18. [Epub ahead of print]
Intestinal Muscosa - Pig
Lu J, Grenache D (2010) High-throughput tissue homogenization method and tissue-based quality control materials for a clinical assay of the intestinal disaccharidases. Clinica Chimica Acta 411(9-10):754-757
Liver - Monkey
Rayner KJ, Esau CC, Hussain FN, McDaniel AL, Marshall SM, van Gils JM, Ray TD, Sheedy FJ, Goedeke L, Liu X, Khatsenko OG, Kaimal V, Lees CJ, Fernandez-Hernando C, Fisher EA, Temel RE, Moore KJ (2011) Inhibition of miR-33a/b in non-human primates raises plasma HDL and lowers VLDL triglycerides. Nature 478(7369):404-7
Lebold KM, Grant KA, Freeman WM, Wiren KM, Miller GW, Kiley C, Leonard SW, Traber MG (2010) Individual Differences in Hyperlipidemia and Vitamin E Status in Response to Chronic Alcohol Self-Administration in Cynomolgus Monkeys. Alcohol Clin Exp Res 35(3):474-83
Lung - Cattle
Hong N, De-Xing Q, Deng-Xiang Z, Long-Zhong R (2012) A Simple Cultural Method for Detection of Mycoplasma bovis. J Anim Vet 11(10):1643-1646
Lung - Human
Booth AJ, Hadley R, Cornett AM, Dreffs AA, Matthes SA, Tsui JL, Weiss K, Horowitz JC, Fiore VF, Barker TH, Moore BB, Martinez FJ, Niklason LE, White ES (2012) Acellular normal and fibrotic human lung matrices as a culture system for in vitro investigation. Am J Respir Crit Care Med 186(9):866-76
Sivam S, Sciurba FC, Lucht LA, Zhang Y, Duncan SR, Norris KA, Morris A (2011) Distribution of Pneumocystis jirovecii in lungs from colonized COPD patients. Diagn Microbiol Infect Dis 71(1):24-8
Muscle - Human
Battaglia GM, Zheng D, Hickner RC, Houmard JA (2012) Effect of exercise training on metabolic flexibility in response to a high-fat diet in obese individuals. Am J Physiol Endocrinol Metab 303(12):E1440-5
Frank P, Katz A, Andersson E, Sahlin K (2012) Acute exercise reverses starvation-mediated insulin resistance in humans. Am J Physiol Endocrinol Metab 2012 Dec 26 [Epub ahead of print]
Smith LR, Chambers HG, Subramaniam S, Lieber RL (2012) Transcriptional abnormalities of hamstring muscle contractures in children with cerebral palsy. PLoS One 7(8):e40686
Smith LR, Lee KS, Ward SR, Chambers HG, Lieber RL (2011) Hamstring contractures in children with spastic cerebral palsy result from a stiffer extracellular matrix and increased in vivo sarcomere length. J Physiol. 589(Pt 10):2625-39
Tirrell TF, Cook MS, Carr JA, Lin E, Ward SR, Lieber RL (2012) Human skeletal muscle biochemical diversity. J Exp Biol 215(Pt 15):2551-9
Muscle - Various Primates
Smith KM, Anthony SJ, Switzer WM, Epstein JH, Seimon T, Jia H, Sanchez MD, Huynh TT, Galland GG, Shapiro SE, Sleeman JM, McAloose D, Stuchin M, Amato G, Kolokotronis SO, Lipkin WI, Karesh WB, Daszak P, Marano N (2012) Zoonotic viruses associated with illegally imported wildlife products. PLoS One 7:e29505
Nasal Polyps - Human
Peterson S, Poposki JA, Nagarkar DR, Chustz RT, Peters AT, Suh LA, Carter R, Norton J, Harris KE, Grammer LC, Tan BK, Chandra RK, Conley DB, Kern RC, Schleimer RP, Kato A. (2012) Increased expression of CC chemokine ligand 18 in patients with chronic rhinosinusitis with nasal polyps. . J Allergy Clin Immunol 129(1):119-27.
Poposki JA, Uzzaman A, Nagarkar DR, Chustz RT, Peters AT, Suh LA, Carter R, Norton J, Harris KE, Grammer LC, Tan BK, Chandra RK, Conley DB, Kern RC, Schleimer RP, Kato A (2011) Increased expression of the chemokine CCL23 in eosinophilic chronic rhinosinusitis with nasal polyps. J Allergy Clin Immunol 128:73-81
Takabayashi T, Kato A, Peters AT, Suh LA, Carter R, Norton J, Grammer LC, Tan BK, Chandra RK, Conley DB, Kern RC, Fujieda S, Schleimer RP (2012) Glandular mast cells with distinct phenotype are highly elevated in chronic rhinosinusitis with nasal polyps. J Allergy Clin Immunol 130(2):410-20.e5
Tan BK, Li QZ, Suh L, Kato A, Conley DB, Chandra RK, Zhou J, Norton J, Carter R, Hinchcliff M, Harris K, Peters A, Grammer LC, Kern RC, Mohan C, Schleimer RP (2011) Evidence for intranasal antinuclear autoantibodies in patients with chronic rhinosinusitis with nasal polyps.. J Allergy Clin Immunol 128:1198-1206
Oropharynx - Human
Winder DM, Ball SL, Vaughan K, Hanna N, Woo YL, Fränzer JT, Sterling JC, Stanley MA, Sudhoff H, Goon PK (2009) Sensitive HPV detection in oropharyngeal cancers. BMC Cancer 9:440
Plasma (Protein precipitate resuspension)- Human
Mostovenko E, Scott HC, Klychnikov O, Dalebout H, Deedler AM, Palmblad M (2012) Protein Fractionation for Quantitative Plasma Proteomics by Semi-Selective Precipitation. J Proteomics Bioinform 5(9): 217-221
Spleen- Cow
Palomares RA, Walz HG, Brock KV (2013) Expression of type I interferon-induced antiviral state and pro-apoptosis markers during experimental infection with low or high virulence bovine viral diarrhea virus in beef calves. Virus Res pii: S0168-1702(13)00060-9. doi: 10.1016/j.virusres.2013.02.010. [Epub ahead of print]
Skin - Human
Marji J, O'Donoghue SI, McClintock D, Satagopam VP, Schneider R, Ratner D, Worman HJ, Gordon LB, Djabali K (2010) Defective Lamin A-Rb Signaling in Hutchinson-Gilford Progeria Syndrome and Reversal by Farnesyltransferase Inhibition. PLoS One 5(6): e11132
Tumor Melanoma - Human
Ke H, Augustine CK, Gandham VD, Jin JY, Tyler DS, Akiyama SK, Hall RP, Zhang JY (2012) CYLD Inhibits Melanoma Growth and Progression through Suppression of the JNK/AP-1 and Beta1-Integrin Signaling Pathways. J Invest Dermatol 133(1):221-9
Poulikakos PI, Persaud Y, Janakiraman M, Kong X, Ng C, Moriceau G, Shi H, Atefi M, Titz B, Gabay MT, Salton M, Dahlman KB, Tadi M, Wargo JA, Flaherty KT, Kelley MC, Misteli T, Chapman1 PB, Sosman JA, Graeber TG, Ribas A, Lo RS, Rosen N, Solit DB (2011) RAF inhibitor resistance is mediated by dimerization of aberrantly spliced BRAF(V600E). Nature 480(7377):387-90
Tumor Neuroblastoma - Human
Weiss GJ, Liang WS, Izatt T, Arora S, Cherni I, Raju RN, Hostetter G, Kurdoglu A, Christoforides A, Sinari S, Baker AS, Metpally R, Tembe WD, Phillips L, Von Hoff DD, Craig DW, Carpten JD (2012) Paired tumor and normal whole genome sequencing of metastatic olfactory neuroblastoma. PLoS One 7(5):e37029
Tumor Pancreatic Adenocarcinoma - Human
Liang WS, Craig DW, Carpten J, Borad MJ, Demeure MJ, Weiss GJ, Izatt T, Sinari S, Christoforides A, Aldrich J, Kurdoglu A, Barrett M, Phillips L, Benson H, Tembe W, Braggio E, Kiefer JA, Legendre C, Posner R, Hostetter GH, Baker A, Egan JB, Han H, Lake D, Stites EC, Ramanathan RK, Fonseca R, Stewart AK, Von Hoff D (2012) Genome-wide characterization of pancreatic adenocarcinoma patients using next generation sequencing. PLoS One 7(10):e43192.
Umbilical Cord - Human
Jones J, Jones M, Plate C, Lewis D (2012) The Detection of 1-Palmitoyl-2-oleoyl-sn-glycero-3-phosphoethanol and Ethyl Glucuronide in Human Umbilical Cord. AJAC 3: 800-810
Umbilical Cord and Meconium - Human
Marin SJ, Christensen RD, Baer VL, Clark CJ, McMillin GA (2011) Nicotine and metabolites in paired umbilical cord tissue and meconium specimens. Ther Drug Monit 33(1):80-5
Bacteria - L. mesenteroides
Kim JE, Eom HJ, Kim Y, Ahn JE, Kim JH, Han NS (2012) Enhancing acid tolerance of Leuconostoc mesenteroides with glutathione. Biotechnol Lett 4(4):683-7
Bacteria - mixed
Liu GH, Ye Z, Tong K, Zhang, YH (2013) Biotreatment of heavy oil wastewater by combined upflow anaerobic sludge blanket and immobilized biological aerated filter in a pilot-scale test. Biochem Eng J 72(2013):48-53
Mammalian Cell Lines
Thomas SN, Waters KM, Morgan WF, Yang AJ, Baulch JE (2012) Quantitative proteomic analysis of mitochondrial proteins reveals prosurvival mechanisms in the perpetuation of radiation-induced genomic instability. Free Radic Biol Med 53(3):618-28
Townsend KL, An D, Lynes MD, Huang TL, Zhang H, Goodyear LJ, Tseng YH (2012) Increased Mitochondrial Activity in BMP7-treated Brown Adipocytes, Due to Increased CPT1- and CD36-mediated Fatty Acid Uptake. Antioxid Redox Signal 2012 Sep 3. [Epub ahead of print]
Willis MN, Liu Y, Biterova EI, Simpson MA, Kim H, Lee J, Barycki JJ (2011) Enzymatic defects underlying hereditary glutamate cysteine ligase deficiency are mitigated by association of the catalytic and regulatory subunits. Biochemistry 26;50(29):6508-17
Wu S, Wang L, Guo W, Liu X, Liu J, Wei X, Fang B (2011) Analogues and derivatives of oncrasin-1, a novel inhibitor of the C-terminal domain of RNA polymerase II and their antitumor activities. J Med Chem 54(8):2668-79
Stem Cells
Song JS, Kim SO, Kim SH, Choi HJ, Son HK, Jung HS, Kim CS, Lee JH (2012) In vitro and in vivo characteristics of stem cells derived from the periodontal ligament of human deciduous and permanent teeth. Tissue Eng Part A 18(19-20):2040-51
Yeast (C. albicans)
Badrane H, Nguyen MH, Blankenship JR, Cheng S, Hao B, Mitchell AP, Clancy CJ (2012) Rapid redistribution of phosphatidylinositol-(4,5)-bisphosphate and septins during the Candida albicans response to caspofungin. Antimicrob Agents Chemother 56(9):4614-24
Fanning S, Xu W, Beaurepaire C, Suhan JP, Nantel A, Mitchell AP (2012) Functional control of the Candida albicans cell wall by catalytic protein kinase A subunit Tpk1. Mol Microbiol 86(2):284-302
Finkel JS, Yudanin N, Nett JE, Andes DR, Mitchell AP. (2011) Application of the systematic "DAmP" approach to create a partially defective C. albicans mutant. Fungal Genet Biol 48(11):1056-61
Ganguly S, Bishop AC, Xu W, Ghosh S, Nickerson KW, Lanni F, Patton-Vogt J, Mitchell AP (2011) Zap1 control of cell-cell signaling in Candida albicans biofilms. Eukaryotic Cell 10(11):1448-54
Rauceo JM, Blankenship JR, Fanning S, Hamaker JJ, Deneault JS, Smith FJ, Nantel A, Mitchell AP (2008) Regulation of the Candida albicans cell wall damage response by transcription factor Sko1 and PAS kinase Psk1. Mol Biol Cell 19(7):2741-2751
Yeast (S. cerevisiae)
Kochneva-Pervukhova NV, Alexandrov AI, Ter-Avanesyan MD (2012) Amyloid-mediated sequestration of essential proteins contributes to mutant huntingtin toxicity in yeast. PLoS One 7(1):e29832
Petrie JR, Vanhercke T, Shrestha P, Tahchy AE, White A, Zhou X, Liu Q, Mansour MP, Nichols PD, Singh SP (2012) Recruiting a New Substrate for Triacylglycerol Synthesis in Plants: The Monoacylglycerol Acyltransferase Pathway. PLoS One 7(4): e35214
Vorvis C, Markus SM, Lee WL (2008) Photoactivatable GFP tagging cassettes for protein-tracking studies in the budding yeast Saccharomyces cerevisiae. Yeast 25(9):651-659
Wu X, Liu L, Huang M (2011) Analysis of changes in protein level and subcellular localization during cell cycle progression using the budding yeast Saccharomyces cerevisiae. Methods Mol Biol 782:47-57
Yeast (S. passalidarum)
Hou X, Yao S (2011) Improved inhibitor tolerance in xylose-fermenting yeast Spathaspora passalidarum by mutagenesis and protoplast fusion. Appl Microbiol Biotechnol 93(6):2591-601
Yeast (S. passalidarum, P. Stipitis)
Hou X (2011) Anaerobic xylose fermentation by Spathaspora passalidarum. Appl Microbiol Biotechnol 94(1):205-14
Yeast (Various)
Blankenship JR, Fanning S, Hamaker JJ, Mitchell AP (2010) An extensive circuitry for cell wall regulation in Candida albicans. PLoS Pathog 6(2):e10000752
Meriin AB, Wang Y, Sherman MY (2010) Isolation of aggresomes and other large aggregates. Curr Protoc Cell Biol Chapter 3:Unit 3.38.1-9
Zinkeniciene A, Girkontaite I, Citavicius D (2012) Specific Immunoglobulin E Antibodies to Saprophytic Yeasts in Sera of Atopic Patients Allergic to House Dust Mites. J Investig Allergol Clin Immunol 22(6): 412-418
Caterpillar P. isabella
Marshall KE, Sinclair BJ (2011) Threshold temperatures mediate the impact of reduced snow cover on overwintering freeze-tolerant caterpillars. Naturwissenschaften 99(1):33-41
Cricket
Macmillan HA, Williams CM, Staples JF, Sinclair BJ (2012) Metabolism and energy supply below the critical thermal minimum of a chill-susceptible insect. Exp Biol 215(Pt 8):1366-72
Drosophila melanogaster
Marshall KE, Sinclair BJ (2010) Repeated stress exposure results in a survival-reproduction trade-off in Drosophila melanogaster. Proc Biol Sci 277(1683):963-969
Bazinet A, Marshall KE, MacMillan HA, Williams CM, Sinclair BJ (2010) Rapid changes in desiccation resistance in Drosophila melanogaster are facilitated by changes in cuticular permeability. J Insect Physiol 56(12):2006-12
Koles K, Nunnari J, Korkut C, Barria R, Brewer C, Li Y, Leszyk J, Zhang B, Budnik V (2012) Mechanism of evenness interrupted (evi)-exosome release at synaptic boutons. J Biol Chem 287(20):16820-34
Honey Bee
Bourgeois AL, Rinderer TE, Sylvester HA, Holloway B, Oldroyd BP (2012) Patterns of Apis mellifera infestation by Nosema ceranae support the parasite hypothesis for the evolution of extreme polyandry in eusocial insects. Apidologie 10.1007/s13592-012-0121-5
Bourgeois AL, Rinderer TE (2009) Genetic characterization of Russian honey bee stock selected for improved resistance to Varroa destructor. J Econ Entomol 102(3):1233-1238
Bourgeois L, Sheppard WS, Sylvester HA, Rinderer TE (2010) Genetic Stock Identification of Russian Honey Bees J Economic Entomology 103(3):917-924
Hookworm (larvae)
Krepp J, Gelmedin V, Hawdon JM (2010) Characterisation of hookworm heat shock factor binding protein (HSB-1) during heat shock and larval activation. Int J Parasitol 41(5):533-43
Microsporidia Nosema
Bourgeois AL, Rinderer TE (2010) Genetic detection and quantification of Nosema apis and N. ceranae in the honey bee. J Invertebr Pathol 103(1):53-58
Mosquito
Sim S, Ramirez J L , Dimopoulos G (2012) Dengue Virus Infection of the Aedes aegypti Salivary Gland and Chemosensory Apparatus Induces Genes that Modulate Infection and Blood-Feeding Behavior. PLOS Pathogens 8(3):e1002631
Nematode (B. xylophilus)
Kang J S, Moon YS, Lee SH, Park IK (2013) Inhibition of acetylcholinesterase and glutathione S-transferase of the pinewood nematode (Bursaphelenchus xylophilus) by aliphatic compounds. Pestic Biochem Physiol 2013 epub ahead of print
Kang J S, Kim E, Lee SH, Park IK (2013) Inhibition of acetylcholinesterases of the pinewood nematode, Bursaphelenchus xylophilus, by phytochemicals from plant essential oils. Pestic Biochem Physiol 105(1):50- 56
Kang JS, Moon YS, Lee SH (2012) Inhibition properties of three acetylcholinesterases of the pinewood nematode Bursaphelenchus xylophilus by organophosphates and carbamates. Pestic Biochem Physiol 175(2):154-61
Kang JS, Koh YH, Moon YS, Lee SH (2011) Molecular properties of a venom allergen-like protein suggest a parasitic function in the pinewood nematode Bursaphelenchus xylophilus. International Journal for Parasitology 10.1016/j.ijpara.2011.10.006.
Nematode (C. elegans)
Billing O, Kao G, Naredi P (2011) Mitochondrial Function Is Required for Secretion of DAF-28/Insulin in Mitochondrial Function Is Required for Secretion of DAF-28/Insulin in C. elegans. PLoS One 6:e14507
Edmonds JW, McKinney SL, Prasain JK, Miller MA (2011) The gap junctional protein INX-14 functions in oocyte precursors to promote C. elegans sperm guidance. Dev Biol 359(1):47-58
Hoang HD, Prasain JK, Dorand D, Miller MA (2013) A Heterogeneous Mixture of F-Series Prostaglandins Promotes Sperm Guidance in the Caenorhabditis elegans Reproductive Tract. PLoS Genet 9(1):e1003271
Leboeuf B, Guo X, Garcia LR (2011) The effects of transient starvation persist through direct interactions between CaMKII and ether-a-go-go K+ channels in C. elegans males. Neuroscience 23;175:1-17.
LeBoeuf B, Garcia LR (2011) Cell excitability necessary for male mating behavior in Caenorhabditis elegans is coordinated by interactions between big current and ether-a-go-go family K(+) channels. Genetics 190(3):1025-41
Planaria (D. tigrina)
Serhan CN, Dalli J, Karamnov S, Choi A, Park CK, Xu ZZ, Ji RR, Zhu M, Petasis NA (2012) Macrophage proresolving mediator maresin 1 stimulates tissue regeneration and controls pain. FASEB J. Apr;26(4):1755-65
Spider (N. Plumipes)
Kasumovic MM, Seebacher F (2013) The active metabolic rate predicts a male spider's proximity to females and expected fitness. Biol Lett 9 (2):20121164.
Spider mites (T. urticae)
Screening of lethal genes for feeding RNAi by leaf disc-mediated systematic delivery of dsRNA in Tetranychus urtica. Pesticide Biochemistry and Physiology e pub ahead of print
Zebrafish (embryo)
Chen CF, Chu CY, Chen TH, Lee SJ, Shen CN, Hsiao CD (2011) Establishment of a Transgenic Zebrafish Line for Superficial Skin Ablation and Functional Validation of Apoptosis Modulators In Vivo. PLos One 6(5): e20654
Saili KS, Corvi MM, Weber DN, Patel AU, Das SR, Przybyla J, Anderson KA, Tanguay RL. (2011) Neurodevelopmental low-dose bisphenol A exposure leads to early life-stage hyperactivity and learning deficits in adult zebrafish. Toxicology 29(1-3):83-92
Zooplankton (Daphnia Magna)
Buck JC, Truong L, Blaustein (2011) Predation by zooplankton on Batrachochytrium dendrobatidis: Biological control of the deadly amphibian chytrid fungus. Biodiversity and Conservation 20(14):3549-3553
Wagner ND, Frost PC (2012) Responses of alkaline phosphatase activity in Daphnia to poor nutrition. Oecologia 10.1007/s00442-012-2277-0
Algae (C. reinhardyii, C merolae)
Edwards CD, Beatty JC, Loiselle JB, Vlassov KA, Lefebvre DD (2013) Aerobic transformation of zinc into metal sulfide by photosynthetic microorganisms. Appl Microbiol Biotechnol 2013 Jan 24. [Epub ahead of print]
Fungi (A. fumigatus)
Wiedner SD, Burnum KE, Pederson LM, Anderson LN, Fortuin S, Chauvigné-Hines LM, Shukla AK, Ansong C, Panisko EA, Smith RD, Wright AT (2012) Multiplexed activity-based protein profiling of the human pathogen Aspergillus fumigatus reveals large functional changes upon exposure to human serum. J Biol Chem 287(40):33447-59
Fungi (mycelia of A. nidulans)
Suzuki Y, Murray SL, Wong KH, Davis MA, Hynes MJ (2012) Reprogramming of carbon metabolism by the transcriptional activators AcuK and AcuM in Aspergillus nidulans. Mol Microbiol 84(5):942-64
Fungi (mycelia of P. eryngii)
Yin Y, Liu Y, Jin H, Wang S, Zhao S, Geng X, Li M, Xu F (2012) ) Polyethylene glycol-mediated transformation of fused egfp-hph gene under the control of gpd promoter in Pleurotus eryngii. Biotechnol Lett 34(10):1895-900
Leaf (N. benthamiana)
Mamedov T, Ghosh A, Jones RM, Mett V, Farrance CE, Musiychuk K, Horsey A, Yusibov V (2012) Production of non-glycosylated recombinant proteins in Nicotiana benthamiana plants by co-expressing bacterial PNGase F. J Plant Biol 10(7):773-82
Mamedov, T & Yusibov V (2011) Green algae Chlamydomonas reinhardtii possess endogenous sialylated N-glycans. FEBS Open Bio 1:15-22
Leaf (P. vulgaris)
Screening of lethal genes for feeding RNAi by leaf disc-mediated systematic delivery of dsRNA in Tetranychus urtica. Pesticide Biochemistry and Physiology e pub ahead of print
Moss (Physcomitrella patens)
Augustine R, Pattavina KA, Tüzel E, Vidali L, Bezanilla M (2011) Actin Interacting Protein1 and Actin Depolymerizing Factor Drive Rapid Actin Dynamics in Physcomitrella patens. Plant Cell 23(10):3696-710
Petals (petunia)
Qualley AV, Widhalm JR, Adebesin F, Kish CM, Dudareva N (2012) Completion of the core ?-oxidative pathway of benzoic acid biosynthesis in plants. Proc Natl Acad Sci USA 109(40):16383-8
Potato
Rommens C M, Shakya R, Heap M, Fessenden K (2010) Tastier and Healthier Alternatives to French Fries. J Food Sci 75: H109H115
